Research workbench
AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Q9ERS2)
Analyse AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 alpha… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9ERS2
- Type
- protein
- Length
- 144 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
- UniProt
- Q9ERS2
- Pockets
- 1 · best druggability 0.45
Structure
1 distinct chain · 56% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 | protein | 144 | 56% helix, 0% strand | Q9ERS2 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 197 | 0.45 | 0.73 | 22 | empty |
Compared structures
- 8RGT · Open Complex I from murine brain · an experimental structure of the same protein · chain A against Z, TM-score 0.87
- 8RGQ · Open Complex I from murine liver · an experimental structure of the same protein · chain A against Z, TM-score 0.87
- 7AK5 · Cryo-EM structure of respiratory complex I in the deactive state from mus musculus at 3.2… · an experimental structure of the same protein · chain A against Z, TM-score 0.86
- 7AK5 · Cryo-EM structure of respiratory complex I in the deactive state from Mus musculus at 3.2… · an experimental structure of the same protein · chain A against Z, TM-score 0.86
- 7AK6 · Cryo-EM structure of ND6-P25L mutant respiratory complex I from mus musculus at 3.8 a · an experimental structure of the same protein · chain A against Z, TM-score 0.85
- 7AK6 · Cryo-EM structure of ND6-P25L mutant respiratory complex I from Mus musculus at 3.8 A · an experimental structure of the same protein · chain A against Z, TM-score 0.85
- 8PW5 · CS respirasome from murine liver · an experimental structure of the same protein · chain A against Z1, TM-score 0.85
- 8PW7 · A respirasome from murine liver · an experimental structure of the same protein · chain A against Z1, TM-score 0.85
- 8RGR · Closed Complex I from murine liver · an experimental structure of the same protein · chain A against Z, TM-score 0.85
- 8OM1 · Mitochondrial complex I from Mus musculus in the active state · an experimental structure of the same protein · chain A against Z, TM-score 0.85
- 8PW6 · C respirasome from murine liver · an experimental structure of the same protein · chain A against Z1, TM-score 0.85
- 8OLT · Mitochondrial complex I from Mus musculus in the active state bound with piericidin A · an experimental structure of the same protein · chain A against Z, TM-score 0.85
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ERS2
- Elsewhere: UniProt Q9ERS2 · AlphaFold DB Q9ERS2
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