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AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Q9P0J0)

Analyse AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 alpha… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
Q9P0J0
Type
protein
Length
144 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0xB04E378eF0AA4C281c340b031f20DBef16CA4dC3
Molecule
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
UniProt
Q9P0J0
Pockets
1 · best druggability 0.44

Structure

1 distinct chain · 58% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ANADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13protein14458% helix, 0% strandQ9P0J0

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11680.440.7420empty

Compared structures

  • 5XTH · Cryo-EM structure of human respiratory supercomplex I1III2IV1 · an experimental structure of the same protein · chain A against W, TM-score 0.82
  • 5XTI · Cryo-EM architecture of human respiratory chain megacomplex-I2III2IV2 · an experimental structure of the same protein · chain A against BW, TM-score 0.82
  • 5XTD · Cryo-EM structure of human respiratory complex I · an experimental structure of the same protein · chain A against W, TM-score 0.82
  • 5XTD · Cryo-EM structure of human respiratory complex I · an experimental structure of the same protein · chain A against W, TM-score 0.82
  • 5XTC · Cryo-EM structure of human respiratory complex I transmembrane arm · an experimental structure of the same protein · chain A against W, TM-score 0.76
  • 5XTC · Cryo-EM structure of human respiratory complex I transmembrane arm · an experimental structure of the same protein · chain A against W, TM-score 0.76
  • 5XTB · Cryo-EM structure of human respiratory complex I matrix arm · an experimental structure of the same protein · chain A against W, TM-score 0.13
  • 5XTB · Cryo-EM structure of human respiratory complex I matrix arm · an experimental structure of the same protein · chain A against W, TM-score 0.13

Analyse

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