Research workbench
AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Q9P0J0)
Analyse AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 alpha… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9P0J0
- Type
- protein
- Length
- 144 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB04E378eF0AA4C281c340b031f20DBef16CA4dC3
- Molecule
- NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
- UniProt
- Q9P0J0
- Pockets
- 1 · best druggability 0.44
Structure
1 distinct chain · 58% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 | protein | 144 | 58% helix, 0% strand | Q9P0J0 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 168 | 0.44 | 0.74 | 20 | empty |
Compared structures
- 5XTH · Cryo-EM structure of human respiratory supercomplex I1III2IV1 · an experimental structure of the same protein · chain A against W, TM-score 0.82
- 5XTI · Cryo-EM architecture of human respiratory chain megacomplex-I2III2IV2 · an experimental structure of the same protein · chain A against BW, TM-score 0.82
- 5XTD · Cryo-EM structure of human respiratory complex I · an experimental structure of the same protein · chain A against W, TM-score 0.82
- 5XTD · Cryo-EM structure of human respiratory complex I · an experimental structure of the same protein · chain A against W, TM-score 0.82
- 5XTC · Cryo-EM structure of human respiratory complex I transmembrane arm · an experimental structure of the same protein · chain A against W, TM-score 0.76
- 5XTC · Cryo-EM structure of human respiratory complex I transmembrane arm · an experimental structure of the same protein · chain A against W, TM-score 0.76
- 5XTB · Cryo-EM structure of human respiratory complex I matrix arm · an experimental structure of the same protein · chain A against W, TM-score 0.13
- 5XTB · Cryo-EM structure of human respiratory complex I matrix arm · an experimental structure of the same protein · chain A against W, TM-score 0.13
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9P0J0
- Elsewhere: UniProt Q9P0J0 · AlphaFold DB Q9P0J0
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