Research workbench
AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (Q9LHI0)
Analyse AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 alpha… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9LHI0
- Type
- protein
- Length
- 133 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
- UniProt
- Q9LHI0
- Pockets
- 2 · best druggability 0.70
Structure
1 distinct chain · 62% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | protein | 133 | 62% helix, 0% strand | Q9LHI0 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 316 | 0.70 | 0.83 | 29 | empty |
| 2 | 198 | 0.47 | 0.74 | 24 | empty |
Compared structures
- 7AQR · Cryo-EM structure of Arabidopsis thaliana Complex-I (peripheral arm) · an experimental structure of the same protein · chain A against W, TM-score 0.76
- 7AQR · Cryo-EM structure of arabidopsis thaliana complex-I (peripheral arm) · an experimental structure of the same protein · chain A against W, TM-score 0.76
- 7ARB · Cryo-EM structure of Arabidopsis thaliana Complex-I (complete composition) · an experimental structure of the same protein · chain A against W, TM-score 0.76
- 7ARB · Cryo-EM structure of arabidopsis thaliana complex-I (complete composition) · an experimental structure of the same protein · chain A against W, TM-score 0.76
- 7AR8 · Cryo-EM structure of arabidopsis thaliana complex-I (closed conformation) · an experimental structure of the same protein · chain A against W, TM-score 0.76
- 7AR8 · Cryo-EM structure of Arabidopsis thaliana complex-I (closed conformation) · an experimental structure of the same protein · chain A against W, TM-score 0.76
- 7AR7 · Cryo-EM structure of arabidopsis thaliana complex-I (open conformation) · an experimental structure of the same protein · chain A against W, TM-score 0.74
- 7AR7 · Cryo-EM structure of Arabidopsis thaliana complex-I (open conformation) · an experimental structure of the same protein · chain A against W, TM-score 0.74
- 8BQ6 · Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (Complete conformation… · an experimental structure of the same protein · chain A against W, TM-score 0.72
- 8BPX · Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (Complete composition) · an experimental structure of the same protein · chain A against W, TM-score 0.72
- 8BQ5 · Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (Complete conformation… · an experimental structure of the same protein · chain A against W, TM-score 0.72
- 8BEE · Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (CI peripheral core) · an experimental structure of the same protein · chain A against W, TM-score 0.66
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9LHI0
- Elsewhere: UniProt Q9LHI0 · AlphaFold DB Q9LHI0
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