Research workbench
AlphaFold monomer V2.0 prediction for probable SERINE/THREONINE- protein kinase ndrd (Q54HD2)
Analyse AlphaFold monomer V2.0 prediction for probable SERINE/THREONINE- protein kinase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q54HD2
- Type
- protein
- Length
- 2,112 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- Probable SERINE/THREONINE-protein kinase ndrd
- UniProt
- Q54HD2
- Pockets
- 12 · best druggability 0.76
Structure
1 distinct chain · 15% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable SERINE/THREONINE-protein kinase ndrd | protein | 2112 | 15% helix, 3% strand | Q54HD2 |
Pockets
12 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1142 | 0.76 | 0.78 | 76 | empty |
| 2 | 1137 | 0.74 | 0.77 | 90 | empty |
| 3 | 655 | 0.66 | 0.75 | 61 | empty |
| 4 | 467 | 0.64 | 0.77 | 35 | empty |
| 5 | 234 | 0.61 | 0.81 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54HD2
- Elsewhere: UniProt Q54HD2 · AlphaFold DB Q54HD2
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