Research workbench
AlphaFold monomer V2.0 prediction for nucleoid-associated protein YPO1262/Y2922/YP_0879 (Q8ZGM5)
Analyse AlphaFold monomer V2.0 prediction for nucleoid-associated protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8ZGM5
- Type
- protein
- Length
- 334 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd91633319BDB0a92cbC4f08DeA734Bf74C030064
- Molecule
- Nucleoid-associated protein YPO1262/Y2922/YP_0879
- UniProt
- Q8ZGM5
- Pockets
- 4 · best druggability 0.51
Structure
1 distinct chain · 40% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoid-associated protein YPO1262/Y2922/YP_0879 | protein | 334 | 40% helix, 29% strand | Q8ZGM5 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 281 | 0.51 | 0.74 | 27 | empty |
| 2 | 72 | 0.37 | 0.77 | 17 | empty |
| 3 | 68 | 0.30 | 0.74 | 19 | empty |
| 4 | 50 | 0.27 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8ZGM5
- Elsewhere: UniProt Q8ZGM5 · AlphaFold DB Q8ZGM5
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