Research workbench
AlphaFold monomer V2.0 prediction for nucleoid-associated protein YPA_0980 (Q1C9C5)
Analyse AlphaFold monomer V2.0 prediction for nucleoid-associated protein YPA_0980… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1C9C5
- Type
- protein
- Length
- 334 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6e01080e01Da0b8798c9B0Ea0E75d75D9e49F5Df
- Molecule
- Nucleoid-associated protein YPA_0980
- UniProt
- Q1C9C5
- Pockets
- 3 · best druggability 0.48
Structure
1 distinct chain · 41% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoid-associated protein YPA_0980 | protein | 334 | 41% helix, 28% strand | Q1C9C5 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 220 | 0.48 | 0.75 | 27 | empty |
| 2 | 70 | 0.31 | 0.74 | 17 | empty |
| 3 | 53 | 0.30 | 0.76 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1C9C5
- Elsewhere: UniProt Q1C9C5 · AlphaFold DB Q1C9C5
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