Research workbench
AlphaFold monomer V2.0 prediction for nucleoid-associated protein SAMA_1557 (A1S5V8)
Analyse AlphaFold monomer V2.0 prediction for nucleoid-associated protein SAMA_1557… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1S5V8
- Type
- protein
- Length
- 342 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xcD609cF0CC50806EC1C19a3758EC341c1825f7d4
- Molecule
- Nucleoid-associated protein SAMA_1557
- UniProt
- A1S5V8
- Pockets
- 3 · best druggability 0.64
Structure
1 distinct chain · 40% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoid-associated protein SAMA_1557 | protein | 342 | 40% helix, 28% strand | A1S5V8 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 254 | 0.64 | 0.82 | 37 | empty |
| 2 | 140 | 0.50 | 0.79 | 20 | empty |
| 3 | 51 | 0.25 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1S5V8
- Elsewhere: UniProt A1S5V8 · AlphaFold DB A1S5V8
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