Research workbench
AlphaFold monomer V2.0 prediction for nucleoid-associated protein AVIN_11450 (C1DPE2)
Analyse AlphaFold monomer V2.0 prediction for nucleoid-associated protein AVIN_11450… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C1DPE2
- Type
- protein
- Length
- 337 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- Nucleoid-associated protein AVIN_11450
- UniProt
- C1DPE2
- Pockets
- 3 · best druggability 0.47
Structure
1 distinct chain · 41% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoid-associated protein AVIN_11450 | protein | 337 | 41% helix, 27% strand | C1DPE2 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 112 | 0.47 | 0.79 | 27 | empty |
| 2 | 99 | 0.37 | 0.75 | 13 | empty |
| 3 | 87 | 0.35 | 0.75 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C1DPE2
- Elsewhere: UniProt C1DPE2 · AlphaFold DB C1DPE2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.