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AlphaFold monomer V2.0 prediction for nicotinate dehydrogenase medium molybdopterin subunit (Q0QLF1)

Analyse AlphaFold monomer V2.0 prediction for nicotinate dehydrogenase medium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q0QLF1
Type: protein
Length: 330 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x7782F4817b37743d738e9aF842bf74bd50f2015E
Molecule: Nicotinate dehydrogenase medium molybdopterin subunit
UniProt: Q0QLF1
Pockets: 2 · best druggability 0.69

Structure

1 distinct chain · 32% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Nicotinate dehydrogenase medium molybdopterin subunit	protein	330	32% helix, 26% strand	Q0QLF1

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	157	0.69	0.88	28	empty
2	69	0.33	0.75	20	empty

Compared structures

3HRD · Crystal structure of nicotinate dehydrogenase · an experimental structure of the same protein · chain A against B, TM-score 0.98
3HRD · Crystal structure of nicotinate dehydrogenase · an experimental structure of the same protein · chain A against B, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q0QLF1
Elsewhere: UniProt Q0QLF1 · AlphaFold DB Q0QLF1

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