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AlphaFold monomer V2.0 prediction for methylxanthine N3-demethylase ndmb (H9N290)

Analyse AlphaFold monomer V2.0 prediction for methylxanthine N3-demethylase ndmb… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: H9N290
Type: protein
Length: 355 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x14De1658eC799C8FcA55CCA7F78AcD9b4743D7E4
Molecule: Methylxanthine N3-demethylase ndmb
UniProt: H9N290
Pockets: 5 · best druggability 0.77

Structure

1 distinct chain · 22% helix, 32% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Methylxanthine N3-demethylase ndmb	protein	355	22% helix, 32% strand	H9N290

Pockets

5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	94	0.77	0.98	23	empty
2	190	0.52	0.78	24	empty
3	71	0.46	0.82	24	empty
4	73	0.40	0.79	23	empty
5	63	0.36	0.78	18	empty

Compared structures

6ICL · Pseudomonas putida CBB5 ndmb · an experimental structure of the same protein · chain A against A, TM-score 0.93
6ICL · Pseudomonas putida CBB5 NdmB · an experimental structure of the same protein · chain A against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt H9N290
Elsewhere: UniProt H9N290 · AlphaFold DB H9N290

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