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AlphaFold monomer V2.0 prediction for nucleoside diphosphate kinase a 2 (P52175)

Analyse AlphaFold monomer V2.0 prediction for nucleoside diphosphate kinase a 2 (P52175) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P52175
Type: protein
Length: 152 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xe33Eca57aeE4Ebe2c48b05dD1ffC9A854cfaCbe7
Molecule: Nucleoside diphosphate kinase a 2
UniProt: P52175
Pockets: 1 · best druggability 0.48

Structure

1 distinct chain · 49% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Nucleoside diphosphate kinase a 2	protein	152	49% helix, 16% strand	P52175

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	187	0.48	0.76	27	empty

Compared structures

1BE4 · Nucleoside diphosphate kinase isoform B from bovine retina · an experimental structure of the same protein · chain A against A, TM-score 0.98
1BE4 · Nucleoside diphosphate kinase isoform B from bovine retina · an experimental structure of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P52175
Elsewhere: UniProt P52175 · AlphaFold DB P52175

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