Research workbench

AlphaFold monomer V2.0 prediction for nucleoside diphosphate kinase 7 (Q9QXL8)

Analyse AlphaFold monomer V2.0 prediction for nucleoside diphosphate kinase 7 (Q9QXL8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q9QXL8
Type: protein
Length: 395 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x2B01296Bb57621369D4Ca3C850f48DCF95a4d2d9
Molecule: Nucleoside diphosphate kinase 7
UniProt: Q9QXL8
Pockets: 4 · best druggability 0.70

Structure

1 distinct chain · 35% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Nucleoside diphosphate kinase 7	protein	395	35% helix, 25% strand	Q9QXL8

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	563	0.70	0.79	64	empty
2	130	0.47	0.78	23	empty
3	101	0.46	0.80	18	empty
4	89	0.39	0.77	14	empty

Compared structures

8IYJ · Cryo-EM structure of the 48-nm repeat doublet microtubule from mouse sperm · an experimental structure of the same protein · chain A against 6, TM-score 0.91
8I7R · In situ structure of axonemal doublet microtubules in mouse sperm with 48-nm repeat · an experimental structure of the same protein · chain A against D, TM-score 0.86
8TO0 · 48-nm repeating structure of doublets from mouse sperm flagella · an experimental structure of the same protein · chain A against 6, TM-score 0.83

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9QXL8
Elsewhere: UniProt Q9QXL8 · AlphaFold DB Q9QXL8

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