Research workbench
AlphaFold monomer V2.0 prediction for nucleoside diphosphate kinase 1 (P39207)
Analyse AlphaFold monomer V2.0 prediction for nucleoside diphosphate kinase 1 (P39207) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P39207
- Type
- protein
- Length
- 149 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1e98BA8F2a6e99CF52e657421c066AE47B314812
- Molecule
- Nucleoside diphosphate kinase 1
- UniProt
- P39207
- Pockets
- 1 · best druggability 0.47
Structure
1 distinct chain · 44% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoside diphosphate kinase 1 | protein | 149 | 44% helix, 17% strand | P39207 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 198 | 0.47 | 0.75 | 26 | empty |
Compared structures
- 1U8W · Crystal structure of Arabidopsis thaliana nucleoside diphosphate kinase 1 · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 1U8W · Crystal structure of arabidopsis thaliana nucleoside diphosphate kinase 1 · an experimental structure of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P39207
- Elsewhere: UniProt P39207 · AlphaFold DB P39207
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