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AlphaFold monomer V2.0 prediction for NADH dehydrogenase-like protein SAOUHSC_00878 (Q2FZV7)

Analyse AlphaFold monomer V2.0 prediction for NADH dehydrogenase-like protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q2FZV7
Type: protein
Length: 402 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xBe5052869ae2CCfE8B362617F53C763F9782C97e
Molecule: NADH dehydrogenase-like protein SAOUHSC_00878
UniProt: Q2FZV7
Pockets: 2 · best druggability 0.81

Structure

1 distinct chain · 36% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	NADH dehydrogenase-like protein SAOUHSC_00878	protein	402	36% helix, 28% strand	Q2FZV7

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	978	0.81	0.82	102	empty
2	85	0.46	0.81	20	empty

Compared structures

5NA4 · NADH:QUINONE oxidoreductase (ndh-II) from staphylococcus aureus - E172S mutant · an experimental structure of the same protein · chain A against A, TM-score 0.99
5NA1 · NADH:qui oxidoreductase (NDH-II) from Staphylococcus aureus - holoprotein structure… · an experimental structure of the same protein · chain A against A, TM-score 0.99
5NA1 · NADH:QUINONE oxidoreductase (ndh-II) from staphylococcus aureus - holoprotein structure… · an experimental structure of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q2FZV7
Elsewhere: UniProt Q2FZV7 · AlphaFold DB Q2FZV7

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