Research workbench
AlphaFold monomer V2.0 prediction for probable kinetochore protein NDC80 (Q5A216)
Analyse AlphaFold monomer V2.0 prediction for probable kinetochore protein NDC80… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5A216
- Type
- protein
- Length
- 788 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEa58c7534E5701aA8370E0fAEb19b7e14653e69c
- Molecule
- Probable kinetochore protein NDC80
- UniProt
- Q5A216
- Pockets
- 2 · best druggability 0.48
Structure
1 distinct chain · 58% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable kinetochore protein NDC80 | protein | 788 | 58% helix, 0% strand | Q5A216 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 125 | 0.48 | 0.79 | 19 | empty |
| 2 | 63 | 0.29 | 0.74 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5A216
- Elsewhere: UniProt Q5A216 · AlphaFold DB Q5A216
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