Research workbench
AlphaFold monomer V2.0 prediction for nucleoporin ndc-1 (Q8I4N3)
Analyse AlphaFold monomer V2.0 prediction for nucleoporin ndc-1 (Q8I4N3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8I4N3
- Type
- protein
- Length
- 588 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
- Molecule
- Nucleoporin ndc-1
- UniProt
- Q8I4N3
- Pockets
- 8 · best druggability 0.78
Structure
1 distinct chain · 65% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoporin ndc-1 | protein | 588 | 65% helix, 0% strand | Q8I4N3 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 176 | 0.78 | 0.94 | 31 | empty |
| 2 | 284 | 0.56 | 0.77 | 35 | empty |
| 3 | 105 | 0.42 | 0.77 | 16 | empty |
| 4 | 134 | 0.41 | 0.75 | 22 | empty |
| 5 | 133 | 0.39 | 0.73 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8I4N3
- Elsewhere: UniProt Q8I4N3 · AlphaFold DB Q8I4N3
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.