Research workbench
AlphaFold monomer V2.0 prediction for receptor-like SERINE/THREONINE- protein kinase ncrk (Q8VYY5)
Analyse AlphaFold monomer V2.0 prediction for receptor-like SERINE/THREONINE- protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8VYY5
- Type
- protein
- Length
- 565 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x700b29D7565FFd228ea7D1Ef5245049B743bf63a
- Molecule
- Receptor-like SERINE/THREONINE-protein kinase ncrk
- UniProt
- Q8VYY5
- Pockets
- 6 · best druggability 0.74
Structure
1 distinct chain · 32% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Receptor-like SERINE/THREONINE-protein kinase ncrk | protein | 565 | 32% helix, 14% strand | Q8VYY5 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 721 | 0.74 | 0.80 | 71 | empty |
| 2 | 142 | 0.47 | 0.77 | 22 | empty |
| 3 | 150 | 0.44 | 0.75 | 24 | empty |
| 4 | 105 | 0.41 | 0.76 | 22 | empty |
| 5 | 84 | 0.35 | 0.76 | 20 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8VYY5
- Elsewhere: UniProt Q8VYY5 · AlphaFold DB Q8VYY5
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