Research workbench
AlphaFold monomer V2.0 prediction for neutral ceramidase 2 (Q304B9)
Analyse AlphaFold monomer V2.0 prediction for neutral ceramidase 2 (Q304B9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q304B9
- Type
- protein
- Length
- 757 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe453de7E616d8EC6deB093C9ee2d563d1c020284
- Molecule
- Neutral ceramidase 2
- UniProt
- Q304B9
- Pockets
- 9 · best druggability 0.69
Structure
1 distinct chain · 27% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Neutral ceramidase 2 | protein | 757 | 27% helix, 27% strand | Q304B9 |
Pockets
9 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 410 | 0.69 | 0.81 | 44 | empty |
| 2 | 432 | 0.60 | 0.75 | 47 | empty |
| 3 | 176 | 0.56 | 0.81 | 38 | empty |
| 4 | 147 | 0.51 | 0.79 | 25 | empty |
| 5 | 144 | 0.47 | 0.78 | 29 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q304B9
- Elsewhere: UniProt Q304B9 · AlphaFold DB Q304B9
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