Research workbench
AlphaFold monomer V2.0 prediction for 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic (Q9M9F5)
Analyse AlphaFold monomer V2.0 prediction for 9-cis-epoxycarotenoid dioxygenase NCED9… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9M9F5
- Type
- protein
- Length
- 657 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7a1388B6Aad67B04634A32f63b8A6D6005eab86c
- Molecule
- 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic
- UniProt
- Q9M9F5
- Pockets
- 7 · best druggability 0.85
Structure
1 distinct chain · 14% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic | protein | 657 | 14% helix, 28% strand | Q9M9F5 |
Pockets
7 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1009 | 0.85 | 0.86 | 88 | empty |
| 2 | 432 | 0.80 | 0.88 | 44 | empty |
| 3 | 53 | 0.69 | 0.97 | 19 | empty |
| 4 | 190 | 0.52 | 0.78 | 24 | empty |
| 5 | 214 | 0.51 | 0.76 | 33 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9M9F5
- Elsewhere: UniProt Q9M9F5 · AlphaFold DB Q9M9F5
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