Research workbench
AlphaFold monomer V2.0 prediction for 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic (Q5MBR5)
Analyse AlphaFold monomer V2.0 prediction for 9-cis-epoxycarotenoid dioxygenase NCED3… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5MBR5
- Type
- protein
- Length
- 608 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb3c0C983Fc44934AC589D7131C08a72544EBB92E
- Molecule
- 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
- UniProt
- Q5MBR5
- Pockets
- 4 · best druggability 0.82
Structure
1 distinct chain · 13% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic | protein | 608 | 13% helix, 31% strand | Q5MBR5 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 379 | 0.82 | 0.90 | 47 | empty |
| 2 | 918 | 0.81 | 0.83 | 82 | empty |
| 3 | 160 | 0.46 | 0.76 | 32 | empty |
| 4 | 101 | 0.35 | 0.74 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5MBR5
- Elsewhere: UniProt Q5MBR5 · AlphaFold DB Q5MBR5
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