Research workbench
AlphaFold monomer V2.0 prediction for 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic (Q5MBR6)
Analyse AlphaFold monomer V2.0 prediction for 9-cis-epoxycarotenoid dioxygenase NCED2… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5MBR6
- Type
- protein
- Length
- 576 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd91633319BDB0a92cbC4f08DeA734Bf74C030064
- Molecule
- 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
- UniProt
- Q5MBR6
- Pockets
- 4 · best druggability 0.80
Structure
1 distinct chain · 17% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic | protein | 576 | 17% helix, 32% strand | Q5MBR6 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 422 | 0.80 | 0.88 | 48 | empty |
| 2 | 573 | 0.79 | 0.84 | 65 | empty |
| 3 | 122 | 0.55 | 0.83 | 16 | empty |
| 4 | 97 | 0.49 | 0.82 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5MBR6
- Elsewhere: UniProt Q5MBR6 · AlphaFold DB Q5MBR6
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