Research workbench
AlphaFold monomer V2.0 prediction for nuclear cap-binding protein subunit 1 (Q6DIE2)
Analyse AlphaFold monomer V2.0 prediction for nuclear cap-binding protein subunit 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6DIE2
- Type
- protein
- Length
- 791 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x35612D34a32C306CA4fc1edA9360D1F717e25950
- Molecule
- Nuclear cap-binding protein subunit 1
- UniProt
- Q6DIE2
- Pockets
- 12 · best druggability 0.75
Structure
1 distinct chain · 68% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nuclear cap-binding protein subunit 1 | protein | 791 | 68% helix, 1% strand | Q6DIE2 |
Pockets
12 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 451 | 0.75 | 0.84 | 49 | empty |
| 2 | 200 | 0.62 | 0.82 | 27 | empty |
| 3 | 56 | 0.59 | 0.92 | 22 | empty |
| 4 | 336 | 0.57 | 0.76 | 45 | empty |
| 5 | 89 | 0.42 | 0.79 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6DIE2
- Elsewhere: UniProt Q6DIE2 · AlphaFold DB Q6DIE2
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