Research workbench
AlphaFold monomer V2.0 prediction for periplasmic nitrate reductase (Q12P44)
Analyse AlphaFold monomer V2.0 prediction for periplasmic nitrate reductase (Q12P44) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q12P44
- Type
- protein
- Length
- 829 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- Periplasmic nitrate reductase
- UniProt
- Q12P44
- Pockets
- 5 · best druggability 0.82
Structure
1 distinct chain · 36% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Periplasmic nitrate reductase | protein | 829 | 36% helix, 19% strand | Q12P44 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 175 | 0.82 | 0.97 | 40 | empty |
| 2 | 164 | 0.82 | 0.98 | 38 | empty |
| 3 | 244 | 0.52 | 0.76 | 30 | empty |
| 4 | 80 | 0.33 | 0.74 | 16 | empty |
| 5 | 58 | 0.27 | 0.74 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q12P44
- Elsewhere: UniProt Q12P44 · AlphaFold DB Q12P44
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