Research workbench
AlphaFold monomer V2.0 prediction for periplasmic nitrate reductase (C0Q0P2)
Analyse AlphaFold monomer V2.0 prediction for periplasmic nitrate reductase (C0Q0P2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C0Q0P2
- Type
- protein
- Length
- 828 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf2D15b36F552E28C07477d6049e64D32304643ed
- Molecule
- Periplasmic nitrate reductase
- UniProt
- C0Q0P2
- Pockets
- 7 · best druggability 0.81
Structure
1 distinct chain · 36% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Periplasmic nitrate reductase | protein | 828 | 36% helix, 20% strand | C0Q0P2 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 157 | 0.81 | 0.97 | 36 | empty |
| 2 | 149 | 0.81 | 0.98 | 39 | empty |
| 3 | 187 | 0.44 | 0.74 | 27 | empty |
| 4 | 127 | 0.42 | 0.76 | 29 | empty |
| 5 | 80 | 0.37 | 0.77 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C0Q0P2
- Elsewhere: UniProt C0Q0P2 · AlphaFold DB C0Q0P2
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