Research workbench
AlphaFold monomer V2.0 prediction for periplasmic nitrate reductase (B4SYT3)
Analyse AlphaFold monomer V2.0 prediction for periplasmic nitrate reductase (B4SYT3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4SYT3
- Type
- protein
- Length
- 828 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x046f0F60E30fEEae356021AFb4bFb96B4DC79519
- Molecule
- Periplasmic nitrate reductase
- UniProt
- B4SYT3
- Pockets
- 5 · best druggability 0.87
Structure
1 distinct chain · 35% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Periplasmic nitrate reductase | protein | 828 | 35% helix, 20% strand | B4SYT3 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 312 | 0.87 | 0.97 | 72 | empty |
| 2 | 302 | 0.53 | 0.74 | 43 | empty |
| 3 | 71 | 0.35 | 0.77 | 16 | empty |
| 4 | 70 | 0.32 | 0.75 | 19 | empty |
| 5 | 56 | 0.29 | 0.75 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4SYT3
- Elsewhere: UniProt B4SYT3 · AlphaFold DB B4SYT3
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