Research workbench
AlphaFold monomer V2.0 prediction for periplasmic nitrate reductase (A9I7M5)
Analyse AlphaFold monomer V2.0 prediction for periplasmic nitrate reductase (A9I7M5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A9I7M5
- Type
- protein
- Length
- 847 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
- Molecule
- Periplasmic nitrate reductase
- UniProt
- A9I7M5
- Pockets
- 4 · best druggability 0.81
Structure
1 distinct chain · 35% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Periplasmic nitrate reductase | protein | 847 | 35% helix, 19% strand | A9I7M5 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 158 | 0.81 | 0.97 | 38 | empty |
| 2 | 158 | 0.81 | 0.97 | 39 | empty |
| 3 | 317 | 0.53 | 0.74 | 38 | empty |
| 4 | 87 | 0.33 | 0.73 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9I7M5
- Elsewhere: UniProt A9I7M5 · AlphaFold DB A9I7M5
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