Research workbench
AlphaFold monomer V2.0 prediction for periplasmic nitrate reductase (B0BR28)
Analyse AlphaFold monomer V2.0 prediction for periplasmic nitrate reductase (B0BR28) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0BR28
- Type
- protein
- Length
- 827 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8b72a4c628baA76f05175Df71bc6E1918ED560d2
- Molecule
- Periplasmic nitrate reductase
- UniProt
- B0BR28
- Pockets
- 5 · best druggability 0.82
Structure
1 distinct chain · 35% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Periplasmic nitrate reductase | protein | 827 | 35% helix, 19% strand | B0BR28 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 161 | 0.82 | 0.98 | 37 | empty |
| 2 | 167 | 0.81 | 0.97 | 38 | empty |
| 3 | 351 | 0.59 | 0.77 | 40 | empty |
| 4 | 84 | 0.33 | 0.74 | 15 | empty |
| 5 | 50 | 0.26 | 0.74 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0BR28
- Elsewhere: UniProt B0BR28 · AlphaFold DB B0BR28
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.