Research workbench
AlphaFold monomer V2.0 prediction for N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase (P68827)
Analyse AlphaFold monomer V2.0 prediction for N-acetylglucosamine-1-phosphodiester… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P68827
- Type
- protein
- Length
- 527 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x16C867aF28165664B3FC5A5E54F51be204a1Beb5
- Molecule
- N-acetylglucosamine-1-phosphodiester alpha-N- acetylglucosaminidase
- UniProt
- P68827
- Pockets
- 4 · best druggability 0.67
Structure
1 distinct chain · 20% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | N-acetylglucosamine-1-phosphodiester alpha-N- acetylglucosaminidase | protein | 527 | 20% helix, 25% strand | P68827 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 281 | 0.67 | 0.82 | 34 | empty |
| 2 | 149 | 0.54 | 0.81 | 22 | empty |
| 3 | 80 | 0.35 | 0.75 | 17 | empty |
| 4 | 95 | 0.34 | 0.74 | 21 | empty |
Modifications
Observed in the structure: 14 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P68827
- Elsewhere: UniProt P68827 · AlphaFold DB P68827
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