Research workbench
AlphaFold monomer V2.0 prediction for N-acetyl-D-glucosamine kinase (Q8D9M7)
Analyse AlphaFold monomer V2.0 prediction for N-acetyl-D-glucosamine kinase (Q8D9M7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8D9M7
- Type
- protein
- Length
- 303 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x97EfFf2d74994e28D3b69b1503Bd9c292B2Df480
- Molecule
- N-acetyl-D-glucosamine kinase
- UniProt
- Q8D9M7
- Pockets
- 2 · best druggability 0.55
Structure
1 distinct chain · 42% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | N-acetyl-D-glucosamine kinase | protein | 303 | 42% helix, 22% strand | Q8D9M7 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 334 | 0.55 | 0.75 | 49 | empty |
| 2 | 76 | 0.40 | 0.78 | 20 | empty |
Compared structures
- 4DB3 · 1.95 Angstrom Resolution Crystal Structure of N-acetyl-D-glucosamine kinase from Vibrio… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 4DB3 · 1.95 ångström resolution crystal structure of N-acetyl-D-glucosamine kinase from vibrio… · an experimental structure of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8D9M7
- Elsewhere: UniProt Q8D9M7 · AlphaFold DB Q8D9M7
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