Research workbench
AlphaFold monomer V2.0 prediction for probable nicotinate-nucleotide pyrophosphorylase [carboxylating] (O25909)
Analyse AlphaFold monomer V2.0 prediction for probable nicotinate-nucleotide… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O25909
- Type
- protein
- Length
- 273 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
- UniProt
- O25909
- Pockets
- 3 · best druggability 0.48
Structure
1 distinct chain · 42% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable nicotinate-nucleotide pyrophosphorylase [carboxylating] | protein | 273 | 42% helix, 20% strand | O25909 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 121 | 0.48 | 0.80 | 23 | empty |
| 2 | 111 | 0.40 | 0.76 | 16 | empty |
| 3 | 101 | 0.38 | 0.75 | 18 | empty |
Compared structures
- 2B7N · Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2B7N · Crystal structure of quinolinic acid phosphoribosyltransferase from helicobacter pylori · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2B7P · Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2B7P · Crystal structure of quinolinic acid phosphoribosyltransferase from helicobacter pylori… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2B7Q · Crystal structure of quinolinic acid phosphoribosyltransferase from helicobacter pylori… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2B7Q · Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori… · an experimental structure of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O25909
- Elsewhere: UniProt O25909 · AlphaFold DB O25909
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