Research workbench
AlphaFold monomer V2.0 prediction for sodium-dependent nutrient amino acid transporter 1 (B4NDL8)
Analyse AlphaFold monomer V2.0 prediction for sodium-dependent nutrient amino acid… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4NDL8
- Type
- protein
- Length
- 641 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc1e554A0BC6283911A21bdEB64A8E86961a65eb4
- Molecule
- Sodium-dependent nutrient amino acid transporter 1
- UniProt
- B4NDL8
- Pockets
- 7 · best druggability 0.74
Structure
1 distinct chain · 69% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sodium-dependent nutrient amino acid transporter 1 | protein | 641 | 69% helix, 2% strand | B4NDL8 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 74 | 0.74 | 0.97 | 25 | empty |
| 2 | 684 | 0.74 | 0.80 | 48 | empty |
| 3 | 559 | 0.66 | 0.77 | 53 | empty |
| 4 | 128 | 0.54 | 0.82 | 21 | empty |
| 5 | 174 | 0.45 | 0.75 | 24 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4NDL8
- Elsewhere: UniProt B4NDL8 · AlphaFold DB B4NDL8
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.