Research workbench
AlphaFold monomer V2.0 prediction for histone H2A deubiquitinase MYSM1 (Q5F3F2)
Analyse AlphaFold monomer V2.0 prediction for histone H2A deubiquitinase MYSM1 (Q5F3F2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5F3F2
- Type
- protein
- Length
- 832 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- Histone H2A deubiquitinase MYSM1
- UniProt
- Q5F3F2
- Pockets
- 7 · best druggability 0.65
Structure
1 distinct chain · 30% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Histone H2A deubiquitinase MYSM1 | protein | 832 | 30% helix, 9% strand | Q5F3F2 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 411 | 0.65 | 0.78 | 46 | empty |
| 2 | 142 | 0.51 | 0.79 | 18 | empty |
| 3 | 176 | 0.43 | 0.74 | 23 | empty |
| 4 | 127 | 0.40 | 0.75 | 15 | empty |
| 5 | 65 | 0.33 | 0.76 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5F3F2
- Elsewhere: UniProt Q5F3F2 · AlphaFold DB Q5F3F2
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