Research workbench
AlphaFold monomer V2.0 prediction for myosin-17 (F4K5J1)
Analyse AlphaFold monomer V2.0 prediction for myosin-17 (F4K5J1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- F4K5J1
- Type
- protein
- Length
- 1,531 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xFfa14EF9812cbceCFF953A0e1f923941F78cc638
- Molecule
- Myosin-17
- UniProt
- F4K5J1
- Pockets
- 13 · best druggability 0.74
Structure
1 distinct chain · 56% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Myosin-17 | protein | 1531 | 56% helix, 9% strand | F4K5J1 |
Pockets
13 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 77 | 0.74 | 0.98 | 25 | empty |
| 2 | 504 | 0.71 | 0.80 | 56 | empty |
| 3 | 458 | 0.70 | 0.80 | 62 | empty |
| 4 | 384 | 0.62 | 0.78 | 44 | empty |
| 5 | 361 | 0.60 | 0.77 | 46 | empty |
Compared structures
- 7KFL · Crystal structure of the cargo-binding domain from the plant class XI myosin (MyoXIk) · an experimental structure of the same protein · chain A against A, TM-score 0.22
- 7KFL · Crystal structure of the cargo-binding domain from the plant class XI myosin (myoxik) · an experimental structure of the same protein · chain A against A, TM-score 0.22
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F4K5J1
- Elsewhere: UniProt F4K5J1 · AlphaFold DB F4K5J1
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