Research workbench
AlphaFold monomer V2.0 prediction for myosin-4 (Q5SX39)
Analyse AlphaFold monomer V2.0 prediction for myosin-4 (Q5SX39) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5SX39
- Type
- protein
- Length
- 1,939 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
- Molecule
- Myosin-4
- UniProt
- Q5SX39
- Pockets
- 8 · best druggability 0.80
Structure
1 distinct chain · 71% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Myosin-4 | protein | 1939 | 71% helix, 6% strand | Q5SX39 |
Pockets
8 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 680 | 0.80 | 0.85 | 70 | empty |
| 2 | 960 | 0.73 | 0.77 | 89 | empty |
| 3 | 436 | 0.68 | 0.80 | 55 | empty |
| 4 | 171 | 0.61 | 0.83 | 20 | empty |
| 5 | 98 | 0.52 | 0.83 | 25 | empty |
Compared structures
- 7QIN · In situ structure of actomyosin complex in skeletal sarcomere · an experimental structure of the same protein · chain A against L, TM-score 0.34
- 7QIN · In situ structure of actomyosin complex in skeletal sarcomere · an experimental structure of the same protein · chain A against L, TM-score 0.34
- 7NEP · Homology model of the in situ actomyosin complex from the A-band of mouse psoas muscle… · an experimental structure of the same protein · chain A against M, TM-score 0.34
- 7NEP · Homology model of the in situ actomyosin complex from the a-band of mouse psoas muscle… · an experimental structure of the same protein · chain A against L, TM-score 0.34
- 7QIO · Homology model of myosin neck domain in skeletal sarcomere · an experimental structure of the same protein · chain A against L, TM-score 0.02
- 7QIO · Homology model of myosin neck domain in skeletal sarcomere · an experimental structure of the same protein · chain A against L, TM-score 0.02
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SX39
- Elsewhere: UniProt Q5SX39 · AlphaFold DB Q5SX39
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