Research workbench
AlphaFold monomer V2.0 prediction for myeloid differentiation primary response protein MYD88 (B3Y680)
Analyse AlphaFold monomer V2.0 prediction for myeloid differentiation primary response… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B3Y680
- Type
- protein
- Length
- 296 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf87a97E0A4bB354D834857B14296240B167cbe70
- Molecule
- Myeloid differentiation primary response protein MYD88
- UniProt
- B3Y680
- Pockets
- 3 · best druggability 0.41
Structure
1 distinct chain · 48% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Myeloid differentiation primary response protein MYD88 | protein | 296 | 48% helix, 9% strand | B3Y680 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 78 | 0.41 | 0.79 | 18 | empty |
| 2 | 76 | 0.33 | 0.74 | 14 | empty |
| 3 | 65 | 0.32 | 0.75 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3Y680
- Elsewhere: UniProt B3Y680 · AlphaFold DB B3Y680
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