Research workbench
AlphaFold monomer V2.0 prediction for major vault protein (Q5R9N2)
Analyse AlphaFold monomer V2.0 prediction for major vault protein (Q5R9N2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5R9N2
- Type
- protein
- Length
- 893 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xcC0F357d3A40260d7607Ff6ffD66bd82a06E96Fa
- Molecule
- Major vault protein
- UniProt
- Q5R9N2
- Pockets
- 6 · best druggability 0.68
Structure
1 distinct chain · 26% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Major vault protein | protein | 893 | 26% helix, 32% strand | Q5R9N2 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 388 | 0.68 | 0.80 | 47 | empty |
| 2 | 69 | 0.37 | 0.78 | 15 | empty |
| 3 | 69 | 0.32 | 0.75 | 17 | empty |
| 4 | 92 | 0.32 | 0.73 | 25 | empty |
| 5 | 56 | 0.27 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5R9N2
- Elsewhere: UniProt Q5R9N2 · AlphaFold DB Q5R9N2
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