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AlphaFold monomer V2.0 prediction for udp-N-acetylglucosamine-- N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (P17443)

Analyse AlphaFold monomer V2.0 prediction for udp-N-acetylglucosamine… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P17443
Type: protein
Length: 355 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xD0Df07413FbF205CF8f5e551F4Bc6E7250CE2998
Molecule: Udp-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol…
UniProt: P17443
Pockets: 2 · best druggability 0.69

Structure

1 distinct chain · 47% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Udp-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	protein	355	47% helix, 15% strand	P17443

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	748	0.69	0.76	76	empty
2	59	0.50	0.86	18	empty

Compared structures

1NLM · Crystal structure of MURG:GLCNAC complex · an experimental structure of the same protein · chain A against A, TM-score 0.95
1NLM · Crystal structure of MURG:GLCNAC complex · an experimental structure of the same protein · chain A against A, TM-score 0.95
1F0K · The 1.9 ångström crystal structure of E. COLI murg · an experimental structure of the same protein · chain A against A, TM-score 0.93
1F0K · The 1.9 ångström crystal structure of E. COLI murg · an experimental structure of the same protein · chain A against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P17443
Elsewhere: UniProt P17443 · AlphaFold DB P17443

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