Research workbench
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-tripeptide --D-alanyl-D-alanine ligase (O83401)
Analyse AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-tripeptide… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O83401
- Type
- protein
- Length
- 459 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- Udp-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
- UniProt
- O83401
- Pockets
- 1 · best druggability 0.71
Structure
1 distinct chain · 39% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | protein | 459 | 39% helix, 21% strand | O83401 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 421 | 0.71 | 0.82 | 55 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O83401
- Elsewhere: UniProt O83401 · AlphaFold DB O83401
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