Research workbench
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-L-alanyl- D-glutamate--2,6-diaminopimelate ligase mure homolog, chloroplastic (Q94LU9)
Analyse AlphaFold monomer V2.0 prediction for udp-N-acetylmuramoyl-L-alanyl… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q94LU9
- Type
- protein
- Length
- 757 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC5922a099548713A6F19035D2FD133b543Cd0322
- Molecule
- Udp-N-acetylmuramoyl-L-alanyl-D-glutamate-- 2,6-diaminopimelate ligase mure homolog…
- UniProt
- Q94LU9
- Pockets
- 7 · best druggability 0.77
Structure
1 distinct chain · 32% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramoyl-L-alanyl-D-glutamate-- 2,6-diaminopimelate ligase mure homolog, chloroplastic | protein | 757 | 32% helix, 16% strand | Q94LU9 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1183 | 0.77 | 0.79 | 98 | empty |
| 2 | 164 | 0.59 | 0.83 | 35 | empty |
| 3 | 171 | 0.54 | 0.80 | 27 | empty |
| 4 | 200 | 0.43 | 0.73 | 23 | empty |
| 5 | 92 | 0.36 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q94LU9
- Elsewhere: UniProt Q94LU9 · AlphaFold DB Q94LU9
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