Research workbench
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase (B4U813)
Analyse AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4U813
- Type
- protein
- Length
- 449 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xE498A46d2e1B852A3eB35a100fb5E0a679D487dA
- Molecule
- Udp-N-acetylmuramate--L-alanine ligase
- UniProt
- B4U813
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 37% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramate--L-alanine ligase | protein | 449 | 37% helix, 27% strand | B4U813 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1123 | 0.76 | 0.79 | 77 | empty |
| 2 | 232 | 0.63 | 0.82 | 30 | empty |
| 3 | 133 | 0.51 | 0.79 | 15 | empty |
| 4 | 96 | 0.44 | 0.79 | 16 | empty |
| 5 | 65 | 0.29 | 0.73 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4U813
- Elsewhere: UniProt B4U813 · AlphaFold DB B4U813
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