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AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase (P17952)

Analyse AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P17952
Type: protein
Length: 491 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xF8cD1d8d93E9783063700De244A6e3cf6A195579
Molecule: Udp-N-acetylmuramate--L-alanine ligase
UniProt: P17952
Pockets: 2 · best druggability 0.76

Structure

1 distinct chain · 37% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Udp-N-acetylmuramate--L-alanine ligase	protein	491	37% helix, 24% strand	P17952

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1012	0.76	0.78	100	empty
2	53	0.37	0.80	16	empty

Compared structures

2F00 · Escherichia COLI murc · an experimental structure of the same protein · chain A against B, TM-score 0.97
2F00 · Escherichia coli MurC · an experimental structure of the same protein · chain A against B, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P17952
Elsewhere: UniProt P17952 · AlphaFold DB P17952

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