Research workbench
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase (Q2KVG1)
Analyse AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2KVG1
- Type
- protein
- Length
- 468 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0EA189b2343A464f560b44103f6A3396Da1dA8a9
- Molecule
- Udp-N-acetylmuramate--L-alanine ligase
- UniProt
- Q2KVG1
- Pockets
- 5 · best druggability 0.64
Structure
1 distinct chain · 37% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramate--L-alanine ligase | protein | 468 | 37% helix, 26% strand | Q2KVG1 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 228 | 0.64 | 0.83 | 38 | empty |
| 2 | 386 | 0.60 | 0.77 | 45 | empty |
| 3 | 80 | 0.38 | 0.77 | 15 | empty |
| 4 | 70 | 0.32 | 0.75 | 18 | empty |
| 5 | 75 | 0.32 | 0.75 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2KVG1
- Elsewhere: UniProt Q2KVG1 · AlphaFold DB Q2KVG1
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