Research workbench
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase (Q7VQI7)
Analyse AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7VQI7
- Type
- protein
- Length
- 480 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D1CfC97AeB2ea731793D7200De8611e451dB49F
- Molecule
- Udp-N-acetylmuramate--L-alanine ligase
- UniProt
- Q7VQI7
- Pockets
- 4 · best druggability 0.80
Structure
1 distinct chain · 35% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramate--L-alanine ligase | protein | 480 | 35% helix, 26% strand | Q7VQI7 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 991 | 0.80 | 0.82 | 90 | empty |
| 2 | 211 | 0.55 | 0.78 | 29 | empty |
| 3 | 159 | 0.51 | 0.78 | 17 | empty |
| 4 | 79 | 0.45 | 0.81 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7VQI7
- Elsewhere: UniProt Q7VQI7 · AlphaFold DB Q7VQI7
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