Research workbench
AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase (A0KPX1)
Analyse AlphaFold monomer V2.0 prediction for udp-N-acetylmuramate--L-alanine ligase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A0KPX1
- Type
- protein
- Length
- 484 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x49aCb8f3495B8CB834BeDb8a8469d2488AF00C58
- Molecule
- Udp-N-acetylmuramate--L-alanine ligase
- UniProt
- A0KPX1
- Pockets
- 4 · best druggability 0.76
Structure
1 distinct chain · 38% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-N-acetylmuramate--L-alanine ligase | protein | 484 | 38% helix, 24% strand | A0KPX1 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 924 | 0.76 | 0.79 | 86 | empty |
| 2 | 65 | 0.37 | 0.79 | 13 | empty |
| 3 | 58 | 0.35 | 0.78 | 15 | empty |
| 4 | 54 | 0.33 | 0.78 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0KPX1
- Elsewhere: UniProt A0KPX1 · AlphaFold DB A0KPX1
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