Research workbench
AlphaFold monomer V2.0 prediction for microsomal triglyceride transfer protein large subunit (P55158)
Analyse AlphaFold monomer V2.0 prediction for microsomal triglyceride transfer protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P55158
- Type
- protein
- Length
- 895 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF25799609c3112487CBaCFd8059A5b2D59a35379
- Molecule
- Microsomal triglyceride transfer protein large subunit
- UniProt
- P55158
- Pockets
- 8 · best druggability 0.87
Structure
1 distinct chain · 32% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Microsomal triglyceride transfer protein large subunit | protein | 895 | 32% helix, 35% strand | P55158 |
Pockets
8 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1186 | 0.87 | 0.87 | 93 | empty |
| 2 | 859 | 0.78 | 0.81 | 99 | empty |
| 3 | 607 | 0.63 | 0.75 | 60 | empty |
| 4 | 82 | 0.59 | 0.87 | 23 | empty |
| 5 | 146 | 0.58 | 0.83 | 29 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55158
- Elsewhere: UniProt P55158 · AlphaFold DB P55158
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