Research workbench
AlphaFold monomer V2.0 prediction for microsomal triglyceride transfer protein large subunit (P55156)
Analyse AlphaFold monomer V2.0 prediction for microsomal triglyceride transfer protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P55156
- Type
- protein
- Length
- 887 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xDAedCe502c997826FD28D12aD4a59b1c3bB855bb
- Molecule
- Microsomal triglyceride transfer protein large subunit
- UniProt
- P55156
- Pockets
- 7 · best druggability 0.84
Structure
1 distinct chain · 33% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Microsomal triglyceride transfer protein large subunit | protein | 887 | 33% helix, 35% strand | P55156 |
Pockets
7 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 906 | 0.84 | 0.85 | 82 | empty |
| 2 | 1044 | 0.81 | 0.83 | 111 | empty |
| 3 | 608 | 0.80 | 0.85 | 40 | empty |
| 4 | 346 | 0.64 | 0.79 | 42 | empty |
| 5 | 580 | 0.63 | 0.75 | 52 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55156
- Elsewhere: UniProt P55156 · AlphaFold DB P55156
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