Research workbench
AlphaFold monomer V2.0 prediction for 2,3-diketo-5-methylthiopentyl-1-phosphate enolase (Q5L1E2)
Analyse AlphaFold monomer V2.0 prediction for 2,3-diketo-5-methylthiopentyl-1-phosphate… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5L1E2
- Type
- protein
- Length
- 413 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7012c0b45c68a2c067644b9d3e5DDa06892c6957
- Molecule
- 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
- UniProt
- Q5L1E2
- Pockets
- 3 · best druggability 0.35
Structure
1 distinct chain · 45% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 2,3-diketo-5-methylthiopentyl-1-phosphate enolase | protein | 413 | 45% helix, 18% strand | Q5L1E2 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 102 | 0.35 | 0.74 | 21 | empty |
| 2 | 71 | 0.32 | 0.75 | 18 | empty |
| 3 | 71 | 0.32 | 0.74 | 15 | empty |
Compared structures
- 2OEL · Crystal structure of a rubisco-like protein from geobacillus kaustophilus liganded with… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2OEL · Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2OEK · Crystal structure of a rubisco-like protein from geobacillus kaustophilus liganded with… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2OEK · Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2OEM · Crystal structure of a rubisco-like protein from geobacillus kaustophilus liganded with… · an experimental structure of the same protein · chain A against B, TM-score 0.98
- 2OEM · Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with… · an experimental structure of the same protein · chain A against B, TM-score 0.98
- 2OEJ · Crystal structure of a rubisco-like protein from Geobacillus kaustophilus (tetramutant… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 2OEJ · Crystal structure of a rubisco-like protein from geobacillus kaustophilus (tetramutant… · an experimental structure of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5L1E2
- Elsewhere: UniProt Q5L1E2 · AlphaFold DB Q5L1E2
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