Research workbench
AlphaFold monomer V2.0 prediction for peptide methionine sulfoxide reductase MSRA/MSRB (Q9JWM8)
Analyse AlphaFold monomer V2.0 prediction for peptide methionine sulfoxide reductase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9JWM8
- Type
- protein
- Length
- 522 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA985B6095a9a818c5b67148D3932856860A953Ef
- Molecule
- Peptide methionine sulfoxide reductase MSRA/MSRB
- UniProt
- Q9JWM8
- Pockets
- 5 · best druggability 0.75
Structure
1 distinct chain · 26% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptide methionine sulfoxide reductase MSRA/MSRB | protein | 522 | 26% helix, 21% strand | Q9JWM8 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1061 | 0.75 | 0.77 | 109 | empty |
| 2 | 80 | 0.41 | 0.78 | 20 | empty |
| 3 | 65 | 0.35 | 0.77 | 17 | empty |
| 4 | 56 | 0.30 | 0.75 | 16 | empty |
| 5 | 50 | 0.25 | 0.73 | 12 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 3BQE · Structure of the central domain (msra) of neisseria meningitidis pilb (reduced form) · an experimental structure of the same protein · chain A against A, TM-score 0.32
- 3BQE · Structure of the central domain (MsrA) of Neisseria meningitidis PilB (reduced form) · an experimental structure of the same protein · chain A against A, TM-score 0.32
- 3BQF · Structure of the central domain (msra) of neisseria meningitidis pilb (complex with a… · an experimental structure of the same protein · chain A against A, TM-score 0.32
- 3BQF · Structure of the central domain (MsrA) of Neisseria meningitidis PilB (complex with a… · an experimental structure of the same protein · chain A against A, TM-score 0.32
- 3BQG · Structure of the central domain (MsrA) of Neisseria meningitidis PilB (sulfenic acid form) · an experimental structure of the same protein · chain A against A, TM-score 0.32
- 3BQG · Structure of the central domain (msra) of neisseria meningitidis pilb (sulfenic acid form) · an experimental structure of the same protein · chain A against A, TM-score 0.32
- 3BQH · Structure of the central domain (msra) of neisseria meningitidis pilb (oxidized form) · an experimental structure of the same protein · chain A against A, TM-score 0.30
- 3BQH · Structure of the central domain (MsrA) of Neisseria meningitidis PilB (oxidized form) · an experimental structure of the same protein · chain A against A, TM-score 0.30
- 3HCG · Structure of the C-terminal domain (msrb) of neisseria meningitidis pilb (reduced form) · an experimental structure of the same protein · chain A against A, TM-score 0.28
- 3HCG · Structure of the C-terminal domain (MsrB) of Neisseria meningitidis PilB (reduced form) · an experimental structure of the same protein · chain A against A, TM-score 0.28
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9JWM8
- Elsewhere: UniProt Q9JWM8 · AlphaFold DB Q9JWM8
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