Research workbench
AlphaFold monomer V2.0 prediction for 3-phosphoshikimate 1-carboxyvinyltransferase (Q8YMB5)
Analyse AlphaFold monomer V2.0 prediction for 3-phosphoshikimate… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8YMB5
- Type
- protein
- Length
- 425 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xDf0A1A1c845A70f9887E8506596072Cb57688C62
- Molecule
- 3-phosphoshikimate 1-carboxyvinyltransferase
- UniProt
- Q8YMB5
- Pockets
- 2 · best druggability 0.75
Structure
1 distinct chain · 37% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 3-phosphoshikimate 1-carboxyvinyltransferase | protein | 425 | 37% helix, 25% strand | Q8YMB5 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 88 | 0.75 | 0.97 | 36 | empty |
| 2 | 54 | 0.28 | 0.74 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8YMB5
- Elsewhere: UniProt Q8YMB5 · AlphaFold DB Q8YMB5
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