Research workbench
AlphaFold monomer V2.0 prediction for merozoite surface protein 1 (P50495)
Analyse AlphaFold monomer V2.0 prediction for merozoite surface protein 1 (P50495) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P50495
- Type
- protein
- Length
- 1,726 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x028515Ca84017068CF074628B04aDe18e16adfD8
- Molecule
- Merozoite surface protein 1
- UniProt
- P50495
- Pockets
- 20 · best druggability 0.72
Structure
1 distinct chain · 59% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Merozoite surface protein 1 | protein | 1726 | 59% helix, 3% strand | P50495 |
Pockets
20 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 414 | 0.72 | 0.83 | 41 | empty |
| 2 | 650 | 0.69 | 0.77 | 63 | empty |
| 3 | 380 | 0.68 | 0.81 | 43 | empty |
| 4 | 213 | 0.63 | 0.83 | 24 | empty |
| 5 | 234 | 0.63 | 0.81 | 30 | empty |
Modifications
Observed in the structure: 8 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P50495
- Elsewhere: UniProt P50495 · AlphaFold DB P50495
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